RDF/OWL ontology and complete instance data for ALL skills in https://github.com/wu-yc/LabClaw/tree/main/skills (215 skills across 6 categories). Uses relative hash-based IRIs (e.g. #bio/alphafold-database) for compact, grounded denotation of every skill and category directly from the directory tree structure. schema.org for metadata, SKOS for hierarchy. Each skill links to its SKILL.md.
All skill and category subjects use relative hash-based IRIs grounded in the repo tree (base + #category/skill-name). Data current as of March 2026.
A LabClaw skill - each subdirectory under a category represents one professional capability with its own SKILL.md.
Bio Skills
Bioinformatics, biology databases, wet-lab robotics, and multi-omics tools (78 skills).
General Skills
General lab productivity, scientific writing, visualization, statistics, and research tools (48 skills).
Literature Skills
Literature search, databases, citation management, and review tools (30 skills).
Medical Skills
Clinical, medical imaging, precision medicine, and clinical-trial tools (20 skills).
Pharma Skills
Drug discovery, chemistry, pharmacovigilance, and target validation tools (34 skills).
Vision Skills
Computer vision, hand-tracking, and 3D pose tools (5 skills).
alphafold-database
analyze_lab_video_cell_behavior
anndata
arboreto
benchling-integration
bioinformatics
biomni
biopython
brenda-database
cellxgene-census
clinpgx-database
cobrapy
cosmic-database
deeptools
detect_common_wetlab_errors
dnanexus-integration
egocentric_view_to_structured_log
ena-database
ensembl-database
esm
etetoolkit
extract_experiment_data_from_video
flowio
geniml
gget
gtars
histolab
hypogenic
kegg-database
labarchive-integration
lamindb
latchbio-integration
matchms
metabolomics-workbench-database
omero-integration
opentrons-integration
pathml
protocol_video_matching
protocolsio-integration
pydeseq2
pylabrobot
pyopenms
pysam
reactome-database
realtime_protocol_guidance_prompts
robot_protocol_step_generator
scanpy
scikit-bio
scvi-tools
string-database
tooluniverse-crispr-screen-analysis
tooluniverse-epigenomics
tooluniverse-expression-data-retrieval
tooluniverse-gene-enrichment
tooluniverse-gwas-drug-discovery
tooluniverse-gwas-finemapping
tooluniverse-gwas-snp-interpretation
tooluniverse-gwas-study-explorer
tooluniverse-gwas-trait-to-gene
tooluniverse-immune-repertoire-analysis
tooluniverse-metabolomics-analysis
tooluniverse-metabolomics
tooluniverse-multi-omics-integration
tooluniverse-multiomic-disease-characterization
tooluniverse-phylogenetics
tooluniverse-polygenic-risk-score
tooluniverse-protein-interactions
tooluniverse-protein-structure-retrieval
tooluniverse-proteomics-analysis
tooluniverse-rnaseq-deseq2
tooluniverse-sequence-retrieval
tooluniverse-single-cell
tooluniverse-spatial-omics-analysis
tooluniverse-spatial-transcriptomics
tooluniverse-structural-variant-analysis
tooluniverse-systems-biology
tooluniverse-variant-analysis
tooluniverse-variant-interpretation
umap-learn
uniprot-database
aeon
article-writing
dask
exploratory-data-analysis
export_experiment_data_to_excel
fair-data
gaussian_splatting_scene_description
generate_cell_analysis_charts
generate_double_column_pdf_report
generate_scientific_method_section
geopandas
get-available-resources
hypothesis-generation
latex-posters
markitdown
matlab
matplotlib
networkx
patent-drafting
peer-review
plotly
polars
pptx-generation
pptx-posters
protocol-writing
pymc
pymoo
pytorch-lightning
regulatory-submission
reproducibility-checklist
scholar-evaluation
science-communication
scientific-brainstorming
scientific-critical-thinking
scientific-diagram-generation
scientific-slides
scientific-visualization
scientific-writing
scikit-learn
scikit-survival
seaborn
shap
statistical-analysis
statistics
statsmodels
sympy
tooluniverse-statistical-modeling
transformers
vaex
venue-templates
visualization
voice_command_to_skill
writing
zarr-python
academic-literature-search
arxiv-search
biomedical-search
biorxiv-database
biorxiv-search
bioservices
citation-management
clinical-trials-search
clinicaltrials-database
clinvar-database
gene-database
geo-database
gwas-database
hmdb-database
literature-review
literature-search
literature
literature_to_hypothesis
medrxiv-search
openalex-database
patents-search
pdb-database
perplexity-search
pubmed-database
pubmed-search
research-grants
research-lookup
review-writing
tooluniverse-literature-deep-research
uspto-database
clinical-decision-support
clinical-reports
clinical
neurokit2
neuropixels-analysis
pydicom
pyhealth
tooluniverse-cancer-variant-interpretation
tooluniverse-clinical-guidelines
tooluniverse-clinical-trial-design
tooluniverse-clinical-trial-matching
tooluniverse-disease-research
tooluniverse-image-analysis
tooluniverse-immunotherapy-response-prediction
tooluniverse-infectious-disease
tooluniverse-precision-medicine-stratification
tooluniverse-precision-oncology
tooluniverse-rare-disease-diagnosis
treatment-plans
adaptyv
chembl-database
chembl-search
chemistry
datamol
deepchem
diffdock
drug-discovery-search
drug-labels-search
drugbank-database
drugbank-search
fda-database
medchem
molfeat
open-targets-search
opentargets-database
pubchem-database
pytdc
rdkit
rowan
tooluniverse-adverse-event-detection
tooluniverse-antibody-engineering
tooluniverse-binder-discovery
tooluniverse-chemical-compound-retrieval
tooluniverse-chemical-safety
tooluniverse-drug-drug-interaction
tooluniverse-drug-repurposing
tooluniverse-drug-research
tooluniverse-drug-target-validation
tooluniverse-network-pharmacology
tooluniverse-pharmacovigilance
tooluniverse-protein-therapeutic-design
tooluniverse-target-research
torch_geometric
torchdrug
zinc-database
egohos-segmentation
hand-tracking-toolkit
hands-3d-pose
handtracking
hot3d